Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb1Q91Y08 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Gm11543-201ENSMUST00000120758 370 ntBASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb1Q91Y08 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhb1Q91Y08 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms