Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm18717-201ENSMUST00000192744 1241 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm43550-201ENSMUST00000200597 303 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm8396-201ENSMUST00000057361 823 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm6973-201ENSMUST00000117080 721 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm14701-201ENSMUST00000117156 348 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm11980-201ENSMUST00000121445 986 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm3650-201ENSMUST00000180600 747 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Mir6990-201ENSMUST00000183724 91 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm44335-201ENSMUST00000196879 141 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm44297-201ENSMUST00000198304 141 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm44346-201ENSMUST00000198851 141 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm43952-201ENSMUST00000203765 751 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 AC129017.2-201ENSMUST00000226118 1284 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb20Q91XZ9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhb20Q91XZ9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms