Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf8Q8VC56 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Gm9727-201ENSMUST00000161387 555 ntBASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 AW822252-206ENSMUST00000208904 237 ntBASIC14.04□□□□□ -0.16
Rnf8Q8VC56 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf8Q8VC56 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Celf4-206ENSMUST00000224553 1729 ntBASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Carlr-201ENSMUST00000181515 2574 ntBASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf8Q8VC56 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf8Q8VC56 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms