Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc12Q8K5B8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.21□□□□□ -0.45
Hoxc12Q8K5B8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc12Q8K5B8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc12Q8K5B8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms