Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ddx54Q8K4L0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm43094-201ENSMUST00000196549 921 ntBASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm43818-201ENSMUST00000200605 466 ntBASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm10012-201ENSMUST00000078252 192 ntBASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ddx54Q8K4L0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 App-207ENSMUST00000227737 2827 ntBASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Gm27516-201ENSMUST00000184237 98 ntBASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Gm38671-201ENSMUST00000200573 130 ntBASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Ddx54Q8K4L0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Gm24644-201ENSMUST00000157114 139 ntBASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Gm3961-201ENSMUST00000204425 994 ntBASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Ddx54Q8K4L0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm19078-201ENSMUST00000206311 727 ntBASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm5425-201ENSMUST00000214125 459 ntBASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx54Q8K4L0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ddx54Q8K4L0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms