Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cchcr1Q8K2I2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Gm14140-201ENSMUST00000119999 995 ntBASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Cchcr1Q8K2I2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cchcr1Q8K2I2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cchcr1Q8K2I2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Gm18733-201ENSMUST00000173950 856 ntBASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cchcr1Q8K2I2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Gm27301-201ENSMUST00000184012 127 ntBASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.19■□□□□ 0.34
Cchcr1Q8K2I2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Cchcr1Q8K2I2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms