Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm17794-201ENSMUST00000220252 955 ntBASIC16.36■□□□□ 0.21
Syne4Q8CII8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.36■□□□□ 0.21
Syne4Q8CII8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.36■□□□□ 0.21
Syne4Q8CII8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syne4Q8CII8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Gm4804-201ENSMUST00000182234 999 ntBASIC16.35■□□□□ 0.21
Syne4Q8CII8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Syne4Q8CII8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syne4Q8CII8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.34■□□□□ 0.21
Syne4Q8CII8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.34■□□□□ 0.21
Syne4Q8CII8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Mir1894-201ENSMUST00000122802 81 ntBASIC16.34■□□□□ 0.21
Syne4Q8CII8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.34■□□□□ 0.21
Syne4Q8CII8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.34■□□□□ 0.21
Syne4Q8CII8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.34■□□□□ 0.21
Syne4Q8CII8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Syne4Q8CII8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.33■□□□□ 0.21
Syne4Q8CII8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Syne4Q8CII8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Syne4Q8CII8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Syne4Q8CII8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Syne4Q8CII8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.33■□□□□ 0.21
Syne4Q8CII8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.33■□□□□ 0.2
Syne4Q8CII8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Syne4Q8CII8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Syne4Q8CII8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms