Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.34□□□□□ -0.11
Vps50Q8CI71 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gm14722-201ENSMUST00000118943 689 ntBASIC14.34□□□□□ -0.11
Vps50Q8CI71 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.34□□□□□ -0.11
Vps50Q8CI71 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.34□□□□□ -0.11
Vps50Q8CI71 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps50Q8CI71 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps50Q8CI71 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.34□□□□□ -0.11
Vps50Q8CI71 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps50Q8CI71 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps50Q8CI71 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps50Q8CI71 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.31□□□□□ -0.12
Vps50Q8CI71 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps50Q8CI71 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps50Q8CI71 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms