Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbm28Q8CGC6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Gm25144-201ENSMUST00000179561 110 ntBASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Gm25352-201ENSMUST00000179815 110 ntBASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Gm17837-201ENSMUST00000186435 985 ntBASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.19■□□□□ 0.34
Rbm28Q8CGC6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Gm13453-201ENSMUST00000118708 357 ntBASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Gm28630-201ENSMUST00000187806 498 ntBASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Gm18766-201ENSMUST00000189811 808 ntBASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbm28Q8CGC6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm12151-201ENSMUST00000121374 290 ntBASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm27306-201ENSMUST00000183970 107 ntBASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbm28Q8CGC6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rbm28Q8CGC6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms