Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc178Q8CDV0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc178Q8CDV0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.27■□□□□ 0.35
Ccdc178Q8CDV0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc178Q8CDV0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc178Q8CDV0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc178Q8CDV0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc178Q8CDV0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Gm18057-201ENSMUST00000208220 503 ntBASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc178Q8CDV0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Gm5312-201ENSMUST00000203728 547 ntBASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc178Q8CDV0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc178Q8CDV0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms