Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
E4f1Q8CCE9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Gm11543-201ENSMUST00000120758 370 ntBASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Gm16026-204ENSMUST00000162652 683 ntBASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Mir6977-201ENSMUST00000184960 64 ntBASIC17.12■□□□□ 0.33
E4f1Q8CCE9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
E4f1Q8CCE9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Gm15693-201ENSMUST00000120470 637 ntBASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Gm27618-201ENSMUST00000183671 60 ntBASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E4f1Q8CCE9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Gm6415-201ENSMUST00000118488 348 ntBASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Gm13223-201ENSMUST00000118609 747 ntBASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Gm2810-201ENSMUST00000118681 990 ntBASIC17.1■□□□□ 0.33
E4f1Q8CCE9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E4f1Q8CCE9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E4f1Q8CCE9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E4f1Q8CCE9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E4f1Q8CCE9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
E4f1Q8CCE9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E4f1Q8CCE9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms