Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh3rf2Q8BZT2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh3rf2Q8BZT2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Gm43703-201ENSMUST00000200523 763 ntBASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Syt7-205ENSMUST00000224135 1557 ntBASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh3rf2Q8BZT2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf2Q8BZT2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.71□□□□□ -0.06
Sh3rf2Q8BZT2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf2Q8BZT2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf2Q8BZT2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sh3rf2Q8BZT2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms