Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sfr1Q8BP27 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm8749-201ENSMUST00000117737 331 ntBASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm15483-201ENSMUST00000120338 456 ntBASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm13365-201ENSMUST00000121188 973 ntBASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.82□□□□□ -0.04
Sfr1Q8BP27 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sfr1Q8BP27 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gm26308-201ENSMUST00000157768 69 ntBASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gm18889-201ENSMUST00000174284 929 ntBASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sfr1Q8BP27 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms