Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Gm24513-201ENSMUST00000174964 138 ntBASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Gm27397-201ENSMUST00000184997 107 ntBASIC17.06■□□□□ 0.32
Samm50Q8BGH2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Gm10175-201ENSMUST00000086013 645 ntBASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Samm50Q8BGH2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gm4995-201ENSMUST00000117247 432 ntBASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gm27702-201ENSMUST00000184512 56 ntBASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gm44492-201ENSMUST00000197012 141 ntBASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Samm50Q8BGH2 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Gm14822-201ENSMUST00000122247 291 ntBASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Gm6736-201ENSMUST00000166583 948 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms