Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Gm14722-201ENSMUST00000118943 689 ntBASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Gm9063-201ENSMUST00000223299 582 ntBASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf38bQ80SY5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Gm12859-201ENSMUST00000117834 427 ntBASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Gm15824-201ENSMUST00000119516 955 ntBASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Gm15487-201ENSMUST00000122373 465 ntBASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf38bQ80SY5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Gm2810-201ENSMUST00000118681 990 ntBASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Gm6745-201ENSMUST00000199216 526 ntBASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf38bQ80SY5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms