Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt40Q6IFX3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Gm7488-201ENSMUST00000117148 684 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Gm15957-201ENSMUST00000118893 974 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Gm44855-201ENSMUST00000205725 362 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt40Q6IFX3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Syt7-205ENSMUST00000224135 1557 ntBASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Gm23547-201ENSMUST00000158210 271 ntBASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Gm33320-201ENSMUST00000192232 530 ntBASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt40Q6IFX3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt40Q6IFX3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Krt40Q6IFX3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt40Q6IFX3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt40Q6IFX3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms