Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.68□□□□□ -0.06
Six4Q61321 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Six4Q61321 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.67□□□□□ -0.06
Six4Q61321 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Six4Q61321 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Six4Q61321 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.67□□□□□ -0.06
Six4Q61321 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Six4Q61321 Gm14701-201ENSMUST00000117156 348 ntBASIC14.67□□□□□ -0.06
Six4Q61321 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.67□□□□□ -0.06
Six4Q61321 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Six4Q61321 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Six4Q61321 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Six4Q61321 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.66□□□□□ -0.06
Six4Q61321 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.66□□□□□ -0.06
Six4Q61321 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Six4Q61321 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Six4Q61321 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Six4Q61321 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Six4Q61321 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Six4Q61321 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.65□□□□□ -0.06
Six4Q61321 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Six4Q61321 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Gm14042-201ENSMUST00000120139 833 ntBASIC14.65□□□□□ -0.06
Six4Q61321 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Six4Q61321 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.65□□□□□ -0.06
Six4Q61321 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Gm5779-201ENSMUST00000218467 910 ntBASIC14.65□□□□□ -0.06
Six4Q61321 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Six4Q61321 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Six4Q61321 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Six4Q61321 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms