Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.87□□□□□ -0.19
Nr1h4Q60641 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nr1h4Q60641 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.86□□□□□ -0.19
Nr1h4Q60641 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Gm5682-201ENSMUST00000173402 505 ntBASIC13.86□□□□□ -0.19
Nr1h4Q60641 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nr1h4Q60641 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.85□□□□□ -0.19
Nr1h4Q60641 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Gm25990-201ENSMUST00000102440 86 ntBASIC13.85□□□□□ -0.19
Nr1h4Q60641 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.85□□□□□ -0.19
Nr1h4Q60641 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.85□□□□□ -0.19
Nr1h4Q60641 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nr1h4Q60641 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nr1h4Q60641 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms