Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Gm10052-201ENSMUST00000168019 960 ntBASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Gm7729-201ENSMUST00000050143 801 ntBASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Pck2-205ENSMUST00000226352 2784 ntBASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Gm11355-201ENSMUST00000121120 306 ntBASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Gm44430-201ENSMUST00000203376 995 ntBASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Gm18101-201ENSMUST00000215769 548 ntBASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-3Q5R1C3 Grk6-205ENSMUST00000224653 2976 ntBASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-3Q5R1C3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms