Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Snx27Q3UHD6 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Gm14042-201ENSMUST00000120139 833 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Gm16215-201ENSMUST00000161990 637 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Gm7730-201ENSMUST00000212486 454 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Snx27Q3UHD6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Gm15321-201ENSMUST00000121290 288 ntBASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Gm24694-201ENSMUST00000180054 110 ntBASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Gm27663-201ENSMUST00000184839 110 ntBASIC15.68■□□□□ 0.1
Snx27Q3UHD6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Gm9229-201ENSMUST00000222777 126 ntBASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snx27Q3UHD6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gm23547-201ENSMUST00000158210 271 ntBASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gm29667-201ENSMUST00000190817 490 ntBASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.67■□□□□ 0.1
Snx27Q3UHD6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snx27Q3UHD6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms