Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Tff1Q08423 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tff1Q08423 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.11□□□□□ -0.47
Tff1Q08423 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.11□□□□□ -0.47
Tff1Q08423 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Gm5682-201ENSMUST00000173402 505 ntBASIC12.11□□□□□ -0.47
Tff1Q08423 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Tff1Q08423 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tff1Q08423 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.11□□□□□ -0.47
Tff1Q08423 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Tff1Q08423 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Tff1Q08423 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tff1Q08423 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 Mir3113-201ENSMUST00000175478 76 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm43767-201ENSMUST00000198933 381 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tff1Q08423 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.1□□□□□ -0.47
Tff1Q08423 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tff1Q08423 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Tff1Q08423 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.09□□□□□ -0.47
Tff1Q08423 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tff1Q08423 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.09□□□□□ -0.47
Tff1Q08423 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.09□□□□□ -0.47
Tff1Q08423 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.09□□□□□ -0.47
Tff1Q08423 Gm25911-201ENSMUST00000157621 56 ntBASIC12.09□□□□□ -0.47
Tff1Q08423 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.09□□□□□ -0.47
Tff1Q08423 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.09□□□□□ -0.47
Tff1Q08423 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tff1Q08423 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms