Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col17a1Q07563 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC21.91■■□□□ 1.1
Col17a1Q07563 Gm37922-201ENSMUST00000195596 455 ntBASIC21.91■■□□□ 1.1
Col17a1Q07563 Gm42929-201ENSMUST00000198374 1286 ntBASIC21.91■■□□□ 1.1
Col17a1Q07563 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC21.91■■□□□ 1.1
Col17a1Q07563 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Col17a1Q07563 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col17a1Q07563 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col17a1Q07563 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Col17a1Q07563 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col17a1Q07563 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Col17a1Q07563 Gm7809-201ENSMUST00000153199 742 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Gm28450-201ENSMUST00000187349 638 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Col17a1Q07563 AC163637.1-201ENSMUST00000215491 1894 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Col17a1Q07563 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Gm12882-201ENSMUST00000121696 517 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Col17a1Q07563 Gm7600-201ENSMUST00000209657 785 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Gm13097-201ENSMUST00000210722 397 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col17a1Q07563 Gm10146-201ENSMUST00000072739 309 ntBASIC21.9■■□□□ 1.1
Col17a1Q07563 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col17a1Q07563 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Col17a1Q07563 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 Gm5846-201ENSMUST00000193146 1414 ntBASIC21.89■■□□□ 1.09
Col17a1Q07563 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Col17a1Q07563 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC21.89■■□□□ 1.09
Col17a1Q07563 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC21.89■■□□□ 1.09
Col17a1Q07563 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 AC126253.1-202ENSMUST00000226732 835 ntBASIC21.89■■□□□ 1.09
Col17a1Q07563 Gm10313-201ENSMUST00000095320 1002 ntBASIC21.89■■□□□ 1.09
Col17a1Q07563 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC21.89■■□□□ 1.09
Col17a1Q07563 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col17a1Q07563 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC21.88■■□□□ 1.09
Col17a1Q07563 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Col17a1Q07563 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC21.88■■□□□ 1.09
Col17a1Q07563 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC21.88■■□□□ 1.09
Col17a1Q07563 Gm3890-201ENSMUST00000182416 207 ntBASIC21.88■■□□□ 1.09
Col17a1Q07563 Gm9540-201ENSMUST00000188230 478 ntBASIC21.88■■□□□ 1.09
Col17a1Q07563 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC21.88■■□□□ 1.09
Col17a1Q07563 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC21.88■■□□□ 1.09
Col17a1Q07563 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.88■■□□□ 1.09
Col17a1Q07563 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col17a1Q07563 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col17a1Q07563 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Col17a1Q07563 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Gm9726-201ENSMUST00000180321 678 ntBASIC21.87■■□□□ 1.09
Col17a1Q07563 Gm18615-201ENSMUST00000222919 1031 ntBASIC21.87■■□□□ 1.09
Col17a1Q07563 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col17a1Q07563 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col17a1Q07563 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col17a1Q07563 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col17a1Q07563 Gm44967-201ENSMUST00000207047 631 ntBASIC21.86■■□□□ 1.09
Col17a1Q07563 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms