Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nkx2-3P97334 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Gm17150-201ENSMUST00000165577 381 ntBASIC18.17■□□□□ 0.5
Nkx2-3P97334 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.17■□□□□ 0.5
Nkx2-3P97334 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nkx2-3P97334 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkx2-3P97334 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.16■□□□□ 0.5
Nkx2-3P97334 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nkx2-3P97334 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.15■□□□□ 0.5
Nkx2-3P97334 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Gm28911-201ENSMUST00000188837 117 ntBASIC18.15■□□□□ 0.5
Nkx2-3P97334 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nkx2-3P97334 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.14■□□□□ 0.5
Nkx2-3P97334 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nkx2-3P97334 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gm27701-201ENSMUST00000184498 110 ntBASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gm6266-201ENSMUST00000203844 806 ntBASIC18.14■□□□□ 0.49
Nkx2-3P97334 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gm19220-201ENSMUST00000222682 803 ntBASIC18.14■□□□□ 0.49
Nkx2-3P97334 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx2-3P97334 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms