Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim43cP86449 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim43cP86449 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim43cP86449 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim43cP86449 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim43cP86449 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trim43cP86449 Gm11543-201ENSMUST00000120758 370 ntBASIC15.81■□□□□ 0.12
Trim43cP86449 Mir1895-201ENSMUST00000122615 79 ntBASIC15.81■□□□□ 0.12
Trim43cP86449 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trim43cP86449 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim43cP86449 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Rprl2-201ENSMUST00000157150 290 ntBASIC15.81■□□□□ 0.12
Trim43cP86449 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Trim43cP86449 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trim43cP86449 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim43cP86449 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim43cP86449 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.81■□□□□ 0.12
Trim43cP86449 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.81■□□□□ 0.12
Trim43cP86449 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim43cP86449 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.8■□□□□ 0.12
Trim43cP86449 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim43cP86449 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim43cP86449 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.8■□□□□ 0.12
Trim43cP86449 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim43cP86449 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim43cP86449 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim43cP86449 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim43cP86449 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Mir6990-201ENSMUST00000183724 91 ntBASIC15.79■□□□□ 0.12
Trim43cP86449 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim43cP86449 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim43cP86449 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trim43cP86449 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim43cP86449 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim43cP86449 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms