Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Lmo4P61969 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Gm15460-201ENSMUST00000118147 391 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Gm14042-201ENSMUST00000120139 833 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Gm14928-201ENSMUST00000120198 477 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Gm12882-201ENSMUST00000121696 517 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.72□□□□□ -0.53
Lmo4P61969 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.72□□□□□ -0.53
Lmo4P61969 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lmo4P61969 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Gm9794-201ENSMUST00000202370 423 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lmo4P61969 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Lmo4P61969 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.72□□□□□ -0.53
Lmo4P61969 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.72□□□□□ -0.53
Lmo4P61969 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lmo4P61969 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.71□□□□□ -0.53
Lmo4P61969 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.71□□□□□ -0.53
Lmo4P61969 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Lmo4P61969 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lmo4P61969 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.71□□□□□ -0.53
Lmo4P61969 Gm15393-201ENSMUST00000120499 219 ntBASIC11.71□□□□□ -0.53
Lmo4P61969 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Lmo4P61969 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.71□□□□□ -0.53
Lmo4P61969 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lmo4P61969 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Lmo4P61969 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lmo4P61969 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lmo4P61969 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lmo4P61969 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lmo4P61969 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lmo4P61969 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lmo4P61969 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lmo4P61969 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lmo4P61969 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms