Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.21□□□□□ -0.29
Vbp1P61759 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vbp1P61759 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vbp1P61759 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vbp1P61759 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vbp1P61759 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vbp1P61759 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vbp1P61759 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.2□□□□□ -0.3
Vbp1P61759 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.2□□□□□ -0.3
Vbp1P61759 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.2□□□□□ -0.3
Vbp1P61759 Gm8318-201ENSMUST00000182954 872 ntBASIC13.2□□□□□ -0.3
Vbp1P61759 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Vbp1P61759 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vbp1P61759 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vbp1P61759 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vbp1P61759 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.19□□□□□ -0.3
Vbp1P61759 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.19□□□□□ -0.3
Vbp1P61759 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.19□□□□□ -0.3
Vbp1P61759 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Vbp1P61759 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Gm43767-201ENSMUST00000198933 381 ntBASIC13.19□□□□□ -0.3
Vbp1P61759 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.19□□□□□ -0.3
Vbp1P61759 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.19□□□□□ -0.3
Vbp1P61759 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vbp1P61759 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.18□□□□□ -0.3
Vbp1P61759 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Vbp1P61759 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Vbp1P61759 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vbp1P61759 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vbp1P61759 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Mir5130-201ENSMUST00000175160 84 ntBASIC13.18□□□□□ -0.3
Vbp1P61759 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.18□□□□□ -0.3
Vbp1P61759 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vbp1P61759 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vbp1P61759 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vbp1P61759 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.18□□□□□ -0.3
Vbp1P61759 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vbp1P61759 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vbp1P61759 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vbp1P61759 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms