Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc11P31313 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc11P31313 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc11P31313 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc11P31313 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc11P31313 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Hoxc11P31313 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.12□□□□□ -0.15
Hoxc11P31313 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc11P31313 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc11P31313 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc11P31313 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hoxc11P31313 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Hoxc11P31313 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Hoxc11P31313 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hoxc11P31313 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc11P31313 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.11□□□□□ -0.15
Hoxc11P31313 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc11P31313 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc11P31313 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Hoxc11P31313 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Celf4-206ENSMUST00000224553 1729 ntBASIC14.1□□□□□ -0.15
Hoxc11P31313 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.1□□□□□ -0.15
Hoxc11P31313 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Gm27920-201ENSMUST00000183953 96 ntBASIC14.1□□□□□ -0.15
Hoxc11P31313 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.1□□□□□ -0.15
Hoxc11P31313 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxc11P31313 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.1□□□□□ -0.15
Hoxc11P31313 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc11P31313 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxc11P31313 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hoxc11P31313 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc11P31313 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms