Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm18101-201ENSMUST00000215769 548 ntBASIC11.93□□□□□ -0.5
Sdc1P18828 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.93□□□□□ -0.5
Sdc1P18828 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.93□□□□□ -0.5
Sdc1P18828 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.93□□□□□ -0.5
Sdc1P18828 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sdc1P18828 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sdc1P18828 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sdc1P18828 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sdc1P18828 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sdc1P18828 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sdc1P18828 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sdc1P18828 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sdc1P18828 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.92□□□□□ -0.5
Sdc1P18828 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.92□□□□□ -0.5
Sdc1P18828 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sdc1P18828 Gm12441-201ENSMUST00000121806 588 ntBASIC11.92□□□□□ -0.5
Sdc1P18828 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.92□□□□□ -0.5
Sdc1P18828 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.92□□□□□ -0.5
Sdc1P18828 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.92□□□□□ -0.5
Sdc1P18828 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.92□□□□□ -0.5
Sdc1P18828 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.92□□□□□ -0.5
Sdc1P18828 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sdc1P18828 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Sdc1P18828 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Sdc1P18828 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc1P18828 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Sdc1P18828 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.91□□□□□ -0.5
Sdc1P18828 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.91□□□□□ -0.5
Sdc1P18828 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Sdc1P18828 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Gm715-201ENSMUST00000117865 831 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Gm8318-201ENSMUST00000182954 872 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.91□□□□□ -0.5
Sdc1P18828 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sdc1P18828 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Sdc1P18828 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Sdc1P18828 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Sdc1P18828 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc1P18828 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.91□□□□□ -0.5
Sdc1P18828 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms