Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.07□□□□□ -0.16
Fv4P11370 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.07□□□□□ -0.16
Fv4P11370 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fv4P11370 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.07□□□□□ -0.16
Fv4P11370 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.07□□□□□ -0.16
Fv4P11370 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Fv4P11370 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Fv4P11370 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fv4P11370 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Fv4P11370 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Fv4P11370 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.06□□□□□ -0.16
Fv4P11370 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Fv4P11370 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Fv4P11370 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.06□□□□□ -0.16
Fv4P11370 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.06□□□□□ -0.16
Fv4P11370 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Fv4P11370 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Fv4P11370 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Fv4P11370 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.05□□□□□ -0.16
Fv4P11370 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Gm27301-201ENSMUST00000184012 127 ntBASIC14.05□□□□□ -0.16
Fv4P11370 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.05□□□□□ -0.16
Fv4P11370 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Fv4P11370 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.05□□□□□ -0.16
Fv4P11370 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Fv4P11370 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Fv4P11370 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Fv4P11370 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.04□□□□□ -0.16
Fv4P11370 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.04□□□□□ -0.16
Fv4P11370 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.04□□□□□ -0.16
Fv4P11370 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Fv4P11370 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms