Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.97□□□□□ -0.33
P06344 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.97□□□□□ -0.33
P06344 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Gm5479-201ENSMUST00000160578 435 ntBASIC12.97□□□□□ -0.33
P06344 Gm22175-201ENSMUST00000175007 78 ntBASIC12.97□□□□□ -0.33
P06344 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.97□□□□□ -0.33
P06344 Gm44872-201ENSMUST00000207864 420 ntBASIC12.97□□□□□ -0.33
P06344 Gm5779-201ENSMUST00000218467 910 ntBASIC12.97□□□□□ -0.33
P06344 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P06344 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
P06344 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
P06344 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
P06344 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.96□□□□□ -0.33
P06344 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
P06344 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
P06344 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
P06344 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.96□□□□□ -0.33
P06344 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.96□□□□□ -0.33
P06344 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.96□□□□□ -0.33
P06344 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06344 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
P06344 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.96□□□□□ -0.34
P06344 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06344 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.95□□□□□ -0.34
P06344 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.95□□□□□ -0.34
P06344 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
P06344 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Gm8749-201ENSMUST00000117737 331 ntBASIC12.95□□□□□ -0.34
P06344 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.95□□□□□ -0.34
P06344 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.95□□□□□ -0.34
P06344 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.95□□□□□ -0.34
P06344 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.95□□□□□ -0.34
P06344 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.95□□□□□ -0.34
P06344 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
P06344 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06344 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
P06344 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.94□□□□□ -0.34
P06344 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
P06344 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
P06344 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.94□□□□□ -0.34
P06344 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P06344 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms