Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxa3P02831 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa3P02831 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxa3P02831 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hoxa3P02831 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.21□□□□□ -0.45
Hoxa3P02831 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.21□□□□□ -0.45
Hoxa3P02831 Gm22175-201ENSMUST00000175007 78 ntBASIC12.21□□□□□ -0.45
Hoxa3P02831 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Gm10253-201ENSMUST00000194270 940 ntBASIC12.21□□□□□ -0.45
Hoxa3P02831 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.21□□□□□ -0.45
Hoxa3P02831 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hoxa3P02831 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hoxa3P02831 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.21□□□□□ -0.46
Hoxa3P02831 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.21□□□□□ -0.46
Hoxa3P02831 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Hoxa3P02831 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hoxa3P02831 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxa3P02831 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.2□□□□□ -0.46
Hoxa3P02831 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa3P02831 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.2□□□□□ -0.46
Hoxa3P02831 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.2□□□□□ -0.46
Hoxa3P02831 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxa3P02831 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxa3P02831 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxa3P02831 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxa3P02831 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms