Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn2O70591 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn2O70591 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn2O70591 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pfdn2O70591 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pfdn2O70591 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn2O70591 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn2O70591 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pfdn2O70591 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pfdn2O70591 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Gm23634-201ENSMUST00000175071 91 ntBASIC12.17□□□□□ -0.46
Pfdn2O70591 Gm29518-201ENSMUST00000190858 372 ntBASIC12.17□□□□□ -0.46
Pfdn2O70591 Gm44454-201ENSMUST00000198541 138 ntBASIC12.17□□□□□ -0.46
Pfdn2O70591 Gm45925-201ENSMUST00000218882 744 ntBASIC12.17□□□□□ -0.46
Pfdn2O70591 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.17□□□□□ -0.46
Pfdn2O70591 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pfdn2O70591 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfdn2O70591 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.16□□□□□ -0.46
Pfdn2O70591 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.16□□□□□ -0.46
Pfdn2O70591 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.16□□□□□ -0.46
Pfdn2O70591 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn2O70591 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn2O70591 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn2O70591 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn2O70591 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm14722-201ENSMUST00000118943 689 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm6345-202ENSMUST00000180900 204 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm19164-201ENSMUST00000210667 640 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn2O70591 Gm15823-201ENSMUST00000064305 670 ntBASIC12.15□□□□□ -0.46
Pfdn2O70591 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn2O70591 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn2O70591 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfdn2O70591 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms