Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Clk3O35492 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.87□□□□□ -0.19
Clk3O35492 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clk3O35492 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clk3O35492 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Clk3O35492 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Clk3O35492 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Clk3O35492 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Clk3O35492 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Clk3O35492 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.86□□□□□ -0.19
Clk3O35492 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.86□□□□□ -0.19
Clk3O35492 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.86□□□□□ -0.19
Clk3O35492 Gm44771-201ENSMUST00000206975 626 ntBASIC13.86□□□□□ -0.19
Clk3O35492 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clk3O35492 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.86□□□□□ -0.19
Clk3O35492 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.86□□□□□ -0.19
Clk3O35492 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.86□□□□□ -0.19
Clk3O35492 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Clk3O35492 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Clk3O35492 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clk3O35492 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clk3O35492 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.85□□□□□ -0.19
Clk3O35492 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clk3O35492 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.85□□□□□ -0.19
Clk3O35492 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Gm1401-201ENSMUST00000122048 772 ntBASIC13.85□□□□□ -0.19
Clk3O35492 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.85□□□□□ -0.19
Clk3O35492 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.85□□□□□ -0.19
Clk3O35492 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Gm18206-201ENSMUST00000207027 926 ntBASIC13.85□□□□□ -0.19
Clk3O35492 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.85□□□□□ -0.19
Clk3O35492 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.85□□□□□ -0.19
Clk3O35492 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.85□□□□□ -0.19
Clk3O35492 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clk3O35492 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.85□□□□□ -0.19
Clk3O35492 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clk3O35492 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clk3O35492 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.85□□□□□ -0.19
Clk3O35492 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clk3O35492 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms