Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cl1O35188 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Mir6990-201ENSMUST00000183724 91 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Gm27920-201ENSMUST00000183953 96 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Gm44335-201ENSMUST00000196879 141 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Gm44297-201ENSMUST00000198304 141 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Gm44346-201ENSMUST00000198851 141 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.67□□□□□ -0.22
Cx3cl1O35188 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cl1O35188 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.66□□□□□ -0.22
Cx3cl1O35188 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cl1O35188 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.65□□□□□ -0.22
Cx3cl1O35188 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.65□□□□□ -0.22
Cx3cl1O35188 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms