Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Gm7367-201ENSMUST00000057611 492 ntBASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim55G3X8Y1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim55G3X8Y1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Carlr-201ENSMUST00000181515 2574 ntBASIC14.96□□□□□ -0.01
Trim55G3X8Y1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim55G3X8Y1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim55G3X8Y1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Grk6-205ENSMUST00000224653 2976 ntBASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim55G3X8Y1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms