Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Gm13365-201ENSMUST00000121188 973 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Thap2-203ENSMUST00000218989 527 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pkd2l1A2A259 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.24□□□□□ -0.13
Pkd2l1A2A259 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Mir6956-201ENSMUST00000183598 62 ntBASIC14.24□□□□□ -0.13
Pkd2l1A2A259 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pkd2l1A2A259 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Gm13616-201ENSMUST00000120600 222 ntBASIC14.23□□□□□ -0.13
Pkd2l1A2A259 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Gm44335-201ENSMUST00000196879 141 ntBASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Gm44297-201ENSMUST00000198304 141 ntBASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Gm44346-201ENSMUST00000198851 141 ntBASIC14.23□□□□□ -0.13
Pkd2l1A2A259 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms