Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm9682-201ENSMUST00000197505 556 ntBASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6d-5A0A075B6B9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm13836-201ENSMUST00000121159 501 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm11780-201ENSMUST00000136880 516 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm10231-201ENSMUST00000181584 441 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm10175-202ENSMUST00000208752 441 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6d-5A0A075B6B9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms