Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.49■□□□□ 0.87
Upk1bQ9Z2C6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Upk1bQ9Z2C6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.49■□□□□ 0.87
Upk1bQ9Z2C6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk1bQ9Z2C6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk1bQ9Z2C6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk1bQ9Z2C6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Upk1bQ9Z2C6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.47■□□□□ 0.87
Upk1bQ9Z2C6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk1bQ9Z2C6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk1bQ9Z2C6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk1bQ9Z2C6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Upk1bQ9Z2C6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.45■□□□□ 0.86
Upk1bQ9Z2C6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Upk1bQ9Z2C6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upk1bQ9Z2C6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk1bQ9Z2C6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk1bQ9Z2C6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upk1bQ9Z2C6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Upk1bQ9Z2C6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upk1bQ9Z2C6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.42■□□□□ 0.86
Upk1bQ9Z2C6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.42■□□□□ 0.86
Upk1bQ9Z2C6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upk1bQ9Z2C6 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Upk1bQ9Z2C6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Upk1bQ9Z2C6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.39■□□□□ 0.86
Upk1bQ9Z2C6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.39■□□□□ 0.85
Upk1bQ9Z2C6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1bQ9Z2C6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1bQ9Z2C6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1bQ9Z2C6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Upk1bQ9Z2C6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Upk1bQ9Z2C6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Upk1bQ9Z2C6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1bQ9Z2C6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.37■□□□□ 0.85
Upk1bQ9Z2C6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1bQ9Z2C6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1bQ9Z2C6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Upk1bQ9Z2C6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1bQ9Z2C6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1bQ9Z2C6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1bQ9Z2C6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1bQ9Z2C6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Upk1bQ9Z2C6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Upk1bQ9Z2C6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1bQ9Z2C6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1bQ9Z2C6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1bQ9Z2C6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Upk1bQ9Z2C6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Upk1bQ9Z2C6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1bQ9Z2C6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1bQ9Z2C6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Upk1bQ9Z2C6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1bQ9Z2C6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Upk1bQ9Z2C6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.33■□□□□ 0.84
Upk1bQ9Z2C6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms