Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Htra1Q9R118 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Htra1Q9R118 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Htra1Q9R118 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Htra1Q9R118 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.29■□□□□ 0.84
Htra1Q9R118 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Htra1Q9R118 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.29■□□□□ 0.84
Htra1Q9R118 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Htra1Q9R118 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Htra1Q9R118 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Htra1Q9R118 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Htra1Q9R118 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Htra1Q9R118 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.27■□□□□ 0.84
Htra1Q9R118 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Htra1Q9R118 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Htra1Q9R118 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Htra1Q9R118 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Htra1Q9R118 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.27■□□□□ 0.83
Htra1Q9R118 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Htra1Q9R118 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htra1Q9R118 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htra1Q9R118 Gm37136-201ENSMUST00000194368 194 ntBASIC20.26■□□□□ 0.83
Htra1Q9R118 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Htra1Q9R118 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Htra1Q9R118 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Htra1Q9R118 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htra1Q9R118 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Htra1Q9R118 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htra1Q9R118 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Htra1Q9R118 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Htra1Q9R118 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Htra1Q9R118 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Htra1Q9R118 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.23■□□□□ 0.83
Htra1Q9R118 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.23■□□□□ 0.83
Htra1Q9R118 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Htra1Q9R118 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Htra1Q9R118 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Htra1Q9R118 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Htra1Q9R118 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Htra1Q9R118 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Htra1Q9R118 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.21■□□□□ 0.83
Htra1Q9R118 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.21■□□□□ 0.83
Htra1Q9R118 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Htra1Q9R118 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Htra1Q9R118 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Htra1Q9R118 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Htra1Q9R118 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htra1Q9R118 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.2■□□□□ 0.82
Htra1Q9R118 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htra1Q9R118 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.2■□□□□ 0.82
Htra1Q9R118 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Htra1Q9R118 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Htra1Q9R118 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htra1Q9R118 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
Htra1Q9R118 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htra1Q9R118 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htra1Q9R118 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Htra1Q9R118 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Htra1Q9R118 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Htra1Q9R118 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Htra1Q9R118 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Htra1Q9R118 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Htra1Q9R118 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.17■□□□□ 0.82
Htra1Q9R118 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Htra1Q9R118 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Htra1Q9R118 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Htra1Q9R118 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Htra1Q9R118 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Htra1Q9R118 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Htra1Q9R118 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Htra1Q9R118 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Htra1Q9R118 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Htra1Q9R118 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Htra1Q9R118 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Htra1Q9R118 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Htra1Q9R118 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.15■□□□□ 0.82
Htra1Q9R118 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.15■□□□□ 0.82
Htra1Q9R118 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htra1Q9R118 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Htra1Q9R118 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Htra1Q9R118 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htra1Q9R118 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htra1Q9R118 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Htra1Q9R118 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Htra1Q9R118 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms