Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nubp2Q9R061 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nubp2Q9R061 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nubp2Q9R061 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.44■□□□□ 0.7
Nubp2Q9R061 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nubp2Q9R061 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nubp2Q9R061 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Nubp2Q9R061 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nubp2Q9R061 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nubp2Q9R061 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.41■□□□□ 0.7
Nubp2Q9R061 Gm12366-201ENSMUST00000121722 873 ntBASIC19.41■□□□□ 0.7
Nubp2Q9R061 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.41■□□□□ 0.7
Nubp2Q9R061 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Gm5786-201ENSMUST00000085368 882 ntBASIC19.41■□□□□ 0.7
Nubp2Q9R061 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.41■□□□□ 0.7
Nubp2Q9R061 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nubp2Q9R061 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Terc-201ENSMUST00000082862 423 ntBASIC19.4■□□□□ 0.7
Nubp2Q9R061 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nubp2Q9R061 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Nubp2Q9R061 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nubp2Q9R061 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nubp2Q9R061 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nubp2Q9R061 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nubp2Q9R061 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nubp2Q9R061 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nubp2Q9R061 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nubp2Q9R061 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.37■□□□□ 0.69
Nubp2Q9R061 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nubp2Q9R061 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nubp2Q9R061 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nubp2Q9R061 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nubp2Q9R061 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.36■□□□□ 0.69
Nubp2Q9R061 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nubp2Q9R061 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nubp2Q9R061 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nubp2Q9R061 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nubp2Q9R061 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nubp2Q9R061 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nubp2Q9R061 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nubp2Q9R061 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nubp2Q9R061 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Nubp2Q9R061 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nubp2Q9R061 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nubp2Q9R061 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nubp2Q9R061 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.34■□□□□ 0.69
Nubp2Q9R061 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nubp2Q9R061 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.34■□□□□ 0.69
Nubp2Q9R061 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nubp2Q9R061 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.33■□□□□ 0.68
Nubp2Q9R061 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nubp2Q9R061 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Gm27502-201ENSMUST00000183495 199 ntBASIC19.32■□□□□ 0.68
Nubp2Q9R061 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nubp2Q9R061 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nubp2Q9R061 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms