Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scn5aQ9JJV9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scn5aQ9JJV9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Scn5aQ9JJV9 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.41■■□□□ 1.34
Scn5aQ9JJV9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Scn5aQ9JJV9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn5aQ9JJV9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn5aQ9JJV9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn5aQ9JJV9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn5aQ9JJV9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scn5aQ9JJV9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Scn5aQ9JJV9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Scn5aQ9JJV9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Scn5aQ9JJV9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Scn5aQ9JJV9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scn5aQ9JJV9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Scn5aQ9JJV9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scn5aQ9JJV9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scn5aQ9JJV9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn5aQ9JJV9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scn5aQ9JJV9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Scn5aQ9JJV9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Scn5aQ9JJV9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scn5aQ9JJV9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Scn5aQ9JJV9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scn5aQ9JJV9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.37■■□□□ 1.33
Scn5aQ9JJV9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scn5aQ9JJV9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scn5aQ9JJV9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Scn5aQ9JJV9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Scn5aQ9JJV9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.35■■□□□ 1.33
Scn5aQ9JJV9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Scn5aQ9JJV9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Scn5aQ9JJV9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Scn5aQ9JJV9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Scn5aQ9JJV9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.33■■□□□ 1.32
Scn5aQ9JJV9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Scn5aQ9JJV9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn5aQ9JJV9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn5aQ9JJV9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Scn5aQ9JJV9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scn5aQ9JJV9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scn5aQ9JJV9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Scn5aQ9JJV9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scn5aQ9JJV9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scn5aQ9JJV9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
Scn5aQ9JJV9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scn5aQ9JJV9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scn5aQ9JJV9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scn5aQ9JJV9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.29■■□□□ 1.32
Scn5aQ9JJV9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scn5aQ9JJV9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scn5aQ9JJV9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.28■■□□□ 1.32
Scn5aQ9JJV9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Scn5aQ9JJV9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.27■■□□□ 1.32
Scn5aQ9JJV9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scn5aQ9JJV9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Scn5aQ9JJV9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scn5aQ9JJV9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Scn5aQ9JJV9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn5aQ9JJV9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scn5aQ9JJV9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Scn5aQ9JJV9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Scn5aQ9JJV9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.24■■□□□ 1.31
Scn5aQ9JJV9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Scn5aQ9JJV9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scn5aQ9JJV9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Scn5aQ9JJV9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn5aQ9JJV9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.22■■□□□ 1.31
Scn5aQ9JJV9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn5aQ9JJV9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn5aQ9JJV9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Scn5aQ9JJV9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Scn5aQ9JJV9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms