Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Barx1Q9ER42 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Barx1Q9ER42 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Barx1Q9ER42 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Barx1Q9ER42 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Barx1Q9ER42 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Barx1Q9ER42 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.95■□□□□ 0.78
Barx1Q9ER42 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.95■□□□□ 0.78
Barx1Q9ER42 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.95■□□□□ 0.78
Barx1Q9ER42 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
Barx1Q9ER42 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Barx1Q9ER42 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Barx1Q9ER42 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Barx1Q9ER42 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Barx1Q9ER42 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Barx1Q9ER42 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Barx1Q9ER42 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Barx1Q9ER42 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Barx1Q9ER42 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Barx1Q9ER42 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Barx1Q9ER42 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.93■□□□□ 0.78
Barx1Q9ER42 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Barx1Q9ER42 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Barx1Q9ER42 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Barx1Q9ER42 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Barx1Q9ER42 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Barx1Q9ER42 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Barx1Q9ER42 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.92■□□□□ 0.78
Barx1Q9ER42 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.92■□□□□ 0.78
Barx1Q9ER42 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.92■□□□□ 0.78
Barx1Q9ER42 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Barx1Q9ER42 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Barx1Q9ER42 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Barx1Q9ER42 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Barx1Q9ER42 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Barx1Q9ER42 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Barx1Q9ER42 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Barx1Q9ER42 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.9■□□□□ 0.78
Barx1Q9ER42 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Barx1Q9ER42 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.89■□□□□ 0.77
Barx1Q9ER42 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Barx1Q9ER42 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Barx1Q9ER42 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Barx1Q9ER42 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Barx1Q9ER42 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.87■□□□□ 0.77
Barx1Q9ER42 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Barx1Q9ER42 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Barx1Q9ER42 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Barx1Q9ER42 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Barx1Q9ER42 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Barx1Q9ER42 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.86■□□□□ 0.77
Barx1Q9ER42 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Barx1Q9ER42 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Barx1Q9ER42 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Barx1Q9ER42 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.85■□□□□ 0.77
Barx1Q9ER42 Gm7417-201ENSMUST00000192950 473 ntBASIC19.85■□□□□ 0.77
Barx1Q9ER42 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Barx1Q9ER42 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Barx1Q9ER42 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.85■□□□□ 0.77
Barx1Q9ER42 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Barx1Q9ER42 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Barx1Q9ER42 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.84■□□□□ 0.77
Barx1Q9ER42 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.84■□□□□ 0.77
Barx1Q9ER42 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Barx1Q9ER42 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Barx1Q9ER42 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Barx1Q9ER42 Gm13241-201ENSMUST00000094493 780 ntBASIC19.83■□□□□ 0.77
Barx1Q9ER42 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Barx1Q9ER42 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.82■□□□□ 0.76
Barx1Q9ER42 Amer2-203ENSMUST00000225247 2662 ntBASIC19.82■□□□□ 0.76
Barx1Q9ER42 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms