Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.27■■□□□ 1
Sh2d4aQ9D7V1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.27■■□□□ 1
Sh2d4aQ9D7V1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh2d4aQ9D7V1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh2d4aQ9D7V1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.27■■□□□ 1
Sh2d4aQ9D7V1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh2d4aQ9D7V1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4aQ9D7V1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4aQ9D7V1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh2d4aQ9D7V1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sh2d4aQ9D7V1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sh2d4aQ9D7V1 Gm6821-201ENSMUST00000107540 542 ntBASIC21.25■□□□□ 0.99
Sh2d4aQ9D7V1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh2d4aQ9D7V1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.25■□□□□ 0.99
Sh2d4aQ9D7V1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4aQ9D7V1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4aQ9D7V1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4aQ9D7V1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh2d4aQ9D7V1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh2d4aQ9D7V1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4aQ9D7V1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4aQ9D7V1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4aQ9D7V1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh2d4aQ9D7V1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4aQ9D7V1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4aQ9D7V1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4aQ9D7V1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4aQ9D7V1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.21■□□□□ 0.99
Sh2d4aQ9D7V1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh2d4aQ9D7V1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh2d4aQ9D7V1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4aQ9D7V1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4aQ9D7V1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4aQ9D7V1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4aQ9D7V1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Sh2d4aQ9D7V1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh2d4aQ9D7V1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4aQ9D7V1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4aQ9D7V1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4aQ9D7V1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4aQ9D7V1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sh2d4aQ9D7V1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh2d4aQ9D7V1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh2d4aQ9D7V1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.16■□□□□ 0.98
Sh2d4aQ9D7V1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.16■□□□□ 0.98
Sh2d4aQ9D7V1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d4aQ9D7V1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.16■□□□□ 0.98
Sh2d4aQ9D7V1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh2d4aQ9D7V1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.16■□□□□ 0.98
Sh2d4aQ9D7V1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh2d4aQ9D7V1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh2d4aQ9D7V1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh2d4aQ9D7V1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh2d4aQ9D7V1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2d4aQ9D7V1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh2d4aQ9D7V1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.13■□□□□ 0.97
Sh2d4aQ9D7V1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4aQ9D7V1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4aQ9D7V1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4aQ9D7V1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4aQ9D7V1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh2d4aQ9D7V1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms