Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Echdc3Q9D7J9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Echdc3Q9D7J9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Echdc3Q9D7J9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Echdc3Q9D7J9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Echdc3Q9D7J9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Echdc3Q9D7J9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Echdc3Q9D7J9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Echdc3Q9D7J9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.4■■□□□ 1.02
Echdc3Q9D7J9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Echdc3Q9D7J9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Echdc3Q9D7J9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Echdc3Q9D7J9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.4■■□□□ 1.02
Echdc3Q9D7J9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Echdc3Q9D7J9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Echdc3Q9D7J9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.39■■□□□ 1.01
Echdc3Q9D7J9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Echdc3Q9D7J9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Echdc3Q9D7J9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Echdc3Q9D7J9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Echdc3Q9D7J9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Echdc3Q9D7J9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
Echdc3Q9D7J9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Echdc3Q9D7J9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Echdc3Q9D7J9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Echdc3Q9D7J9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Echdc3Q9D7J9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Echdc3Q9D7J9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Echdc3Q9D7J9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Echdc3Q9D7J9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Echdc3Q9D7J9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Echdc3Q9D7J9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Echdc3Q9D7J9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Echdc3Q9D7J9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Echdc3Q9D7J9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Echdc3Q9D7J9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.33■■□□□ 1.01
Echdc3Q9D7J9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.33■■□□□ 1.01
Echdc3Q9D7J9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.33■■□□□ 1
Echdc3Q9D7J9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Echdc3Q9D7J9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Echdc3Q9D7J9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Echdc3Q9D7J9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Echdc3Q9D7J9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.31■■□□□ 1
Echdc3Q9D7J9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.31■■□□□ 1
Echdc3Q9D7J9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Echdc3Q9D7J9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Echdc3Q9D7J9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.31■■□□□ 1
Echdc3Q9D7J9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Echdc3Q9D7J9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.3■■□□□ 1
Echdc3Q9D7J9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.3■■□□□ 1
Echdc3Q9D7J9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Echdc3Q9D7J9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Echdc3Q9D7J9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Echdc3Q9D7J9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Echdc3Q9D7J9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Echdc3Q9D7J9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Echdc3Q9D7J9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Echdc3Q9D7J9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Echdc3Q9D7J9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.28■■□□□ 1
Echdc3Q9D7J9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Echdc3Q9D7J9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Echdc3Q9D7J9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Echdc3Q9D7J9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.27■■□□□ 1
Echdc3Q9D7J9 Gm7432-201ENSMUST00000210343 879 ntBASIC21.27■■□□□ 1
Echdc3Q9D7J9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Echdc3Q9D7J9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Echdc3Q9D7J9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Echdc3Q9D7J9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Echdc3Q9D7J9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Echdc3Q9D7J9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Echdc3Q9D7J9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Echdc3Q9D7J9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.24■□□□□ 0.99
Echdc3Q9D7J9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms