Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cthrc1Q9D1D6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cthrc1Q9D1D6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cthrc1Q9D1D6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cthrc1Q9D1D6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cthrc1Q9D1D6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cthrc1Q9D1D6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cthrc1Q9D1D6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cthrc1Q9D1D6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Cthrc1Q9D1D6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cthrc1Q9D1D6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cthrc1Q9D1D6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cthrc1Q9D1D6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.6■□□□□ 0.89
Cthrc1Q9D1D6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 Gm7332-201ENSMUST00000118351 454 ntBASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cthrc1Q9D1D6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Gm14523-201ENSMUST00000117260 558 ntBASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cthrc1Q9D1D6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cthrc1Q9D1D6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cthrc1Q9D1D6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cthrc1Q9D1D6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cthrc1Q9D1D6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cthrc1Q9D1D6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cthrc1Q9D1D6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.55■□□□□ 0.88
Cthrc1Q9D1D6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.54■□□□□ 0.88
Cthrc1Q9D1D6 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.54■□□□□ 0.88
Cthrc1Q9D1D6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cthrc1Q9D1D6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cthrc1Q9D1D6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cthrc1Q9D1D6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cthrc1Q9D1D6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cthrc1Q9D1D6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cthrc1Q9D1D6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cthrc1Q9D1D6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cthrc1Q9D1D6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.88
Cthrc1Q9D1D6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cthrc1Q9D1D6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.52■□□□□ 0.87
Cthrc1Q9D1D6 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cthrc1Q9D1D6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cthrc1Q9D1D6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cthrc1Q9D1D6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cthrc1Q9D1D6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cthrc1Q9D1D6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cthrc1Q9D1D6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.49■□□□□ 0.87
Cthrc1Q9D1D6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cthrc1Q9D1D6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cthrc1Q9D1D6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cthrc1Q9D1D6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cthrc1Q9D1D6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.48■□□□□ 0.87
Cthrc1Q9D1D6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.48■□□□□ 0.87
Cthrc1Q9D1D6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cthrc1Q9D1D6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cthrc1Q9D1D6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.47■□□□□ 0.87
Cthrc1Q9D1D6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cthrc1Q9D1D6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cthrc1Q9D1D6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms