Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chaf1bQ9D0N7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.69■□□□□ 0.9
Chaf1bQ9D0N7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chaf1bQ9D0N7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.68■□□□□ 0.9
Chaf1bQ9D0N7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chaf1bQ9D0N7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1bQ9D0N7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chaf1bQ9D0N7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1bQ9D0N7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chaf1bQ9D0N7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.66■□□□□ 0.9
Chaf1bQ9D0N7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1bQ9D0N7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chaf1bQ9D0N7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chaf1bQ9D0N7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Chaf1bQ9D0N7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chaf1bQ9D0N7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chaf1bQ9D0N7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1bQ9D0N7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Chaf1bQ9D0N7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.62■□□□□ 0.89
Chaf1bQ9D0N7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chaf1bQ9D0N7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.61■□□□□ 0.89
Chaf1bQ9D0N7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chaf1bQ9D0N7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.61■□□□□ 0.89
Chaf1bQ9D0N7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Chaf1bQ9D0N7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.6■□□□□ 0.89
Chaf1bQ9D0N7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1bQ9D0N7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1bQ9D0N7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1bQ9D0N7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chaf1bQ9D0N7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Chaf1bQ9D0N7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chaf1bQ9D0N7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.58■□□□□ 0.89
Chaf1bQ9D0N7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chaf1bQ9D0N7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1bQ9D0N7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1bQ9D0N7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chaf1bQ9D0N7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1bQ9D0N7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1bQ9D0N7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chaf1bQ9D0N7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1bQ9D0N7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1bQ9D0N7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.56■□□□□ 0.88
Chaf1bQ9D0N7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Chaf1bQ9D0N7 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.56■□□□□ 0.88
Chaf1bQ9D0N7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chaf1bQ9D0N7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chaf1bQ9D0N7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.55■□□□□ 0.88
Chaf1bQ9D0N7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chaf1bQ9D0N7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1bQ9D0N7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1bQ9D0N7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chaf1bQ9D0N7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.54■□□□□ 0.88
Chaf1bQ9D0N7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1bQ9D0N7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chaf1bQ9D0N7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1bQ9D0N7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1bQ9D0N7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms