Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpl39lQ9CQD0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rpl39lQ9CQD0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39lQ9CQD0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39lQ9CQD0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39lQ9CQD0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpl39lQ9CQD0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rpl39lQ9CQD0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpl39lQ9CQD0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpl39lQ9CQD0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpl39lQ9CQD0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpl39lQ9CQD0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl39lQ9CQD0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl39lQ9CQD0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl39lQ9CQD0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rpl39lQ9CQD0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Rpl39lQ9CQD0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39lQ9CQD0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39lQ9CQD0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39lQ9CQD0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39lQ9CQD0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39lQ9CQD0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rpl39lQ9CQD0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39lQ9CQD0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39lQ9CQD0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39lQ9CQD0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39lQ9CQD0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39lQ9CQD0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpl39lQ9CQD0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39lQ9CQD0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rpl39lQ9CQD0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39lQ9CQD0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39lQ9CQD0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39lQ9CQD0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rpl39lQ9CQD0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms