Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm13241-201ENSMUST00000094493 780 ntBASIC26.14■■□□□ 1.78
Pcdh15Q99PJ1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Pcdh15Q99PJ1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Pcdh15Q99PJ1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdh15Q99PJ1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdh15Q99PJ1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdh15Q99PJ1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC26.12■■□□□ 1.77
Pcdh15Q99PJ1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdh15Q99PJ1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdh15Q99PJ1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.11■■□□□ 1.77
Pcdh15Q99PJ1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.1■■□□□ 1.77
Pcdh15Q99PJ1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdh15Q99PJ1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.1■■□□□ 1.77
Pcdh15Q99PJ1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdh15Q99PJ1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdh15Q99PJ1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdh15Q99PJ1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Pcdh15Q99PJ1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdh15Q99PJ1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdh15Q99PJ1 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.07■■□□□ 1.76
Pcdh15Q99PJ1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdh15Q99PJ1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.06■■□□□ 1.76
Pcdh15Q99PJ1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdh15Q99PJ1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdh15Q99PJ1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdh15Q99PJ1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdh15Q99PJ1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Pcdh15Q99PJ1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdh15Q99PJ1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdh15Q99PJ1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdh15Q99PJ1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Pcdh15Q99PJ1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 Gm22238-201ENSMUST00000175222 88 ntBASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 Gm9847-201ENSMUST00000052528 599 ntBASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.01■■□□□ 1.75
Pcdh15Q99PJ1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdh15Q99PJ1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Pcdh15Q99PJ1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC26■■□□□ 1.75
Pcdh15Q99PJ1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Pcdh15Q99PJ1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26■■□□□ 1.75
Pcdh15Q99PJ1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdh15Q99PJ1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdh15Q99PJ1 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.99■■□□□ 1.75
Pcdh15Q99PJ1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdh15Q99PJ1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.99■■□□□ 1.75
Pcdh15Q99PJ1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdh15Q99PJ1 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.98■■□□□ 1.75
Pcdh15Q99PJ1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdh15Q99PJ1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdh15Q99PJ1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.98■■□□□ 1.75
Pcdh15Q99PJ1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdh15Q99PJ1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdh15Q99PJ1 Gm7417-201ENSMUST00000192950 473 ntBASIC25.97■■□□□ 1.75
Pcdh15Q99PJ1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.97■■□□□ 1.75
Pcdh15Q99PJ1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdh15Q99PJ1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.96■■□□□ 1.75
Pcdh15Q99PJ1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdh15Q99PJ1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdh15Q99PJ1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdh15Q99PJ1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdh15Q99PJ1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdh15Q99PJ1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Pcdh15Q99PJ1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.93■■□□□ 1.74
Pcdh15Q99PJ1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdh15Q99PJ1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.93■■□□□ 1.74
Pcdh15Q99PJ1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
Pcdh15Q99PJ1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdh15Q99PJ1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.92■■□□□ 1.74
Pcdh15Q99PJ1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.92■■□□□ 1.74
Pcdh15Q99PJ1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Pcdh15Q99PJ1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.91■■□□□ 1.74
Pcdh15Q99PJ1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdh15Q99PJ1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.9■■□□□ 1.74
Pcdh15Q99PJ1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.9■■□□□ 1.74
Pcdh15Q99PJ1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdh15Q99PJ1 Gm12922-201ENSMUST00000120626 809 ntBASIC25.89■■□□□ 1.74
Pcdh15Q99PJ1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.89■■□□□ 1.73
Pcdh15Q99PJ1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdh15Q99PJ1 Amer2-203ENSMUST00000225247 2662 ntBASIC25.87■■□□□ 1.73
Pcdh15Q99PJ1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdh15Q99PJ1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdh15Q99PJ1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.87■■□□□ 1.73
Pcdh15Q99PJ1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdh15Q99PJ1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdh15Q99PJ1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms