Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1b1Q99LU0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1b1Q99LU0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1b1Q99LU0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.68■□□□□ 0.9
Chmp1b1Q99LU0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1b1Q99LU0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp1b1Q99LU0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.66■□□□□ 0.9
Chmp1b1Q99LU0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.66■□□□□ 0.9
Chmp1b1Q99LU0 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.66■□□□□ 0.9
Chmp1b1Q99LU0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1b1Q99LU0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.66■□□□□ 0.9
Chmp1b1Q99LU0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b1Q99LU0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b1Q99LU0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b1Q99LU0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b1Q99LU0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b1Q99LU0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b1Q99LU0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp1b1Q99LU0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
Chmp1b1Q99LU0 Gm9806-201ENSMUST00000051080 552 ntBASIC20.64■□□□□ 0.89
Chmp1b1Q99LU0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.64■□□□□ 0.89
Chmp1b1Q99LU0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Chmp1b1Q99LU0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chmp1b1Q99LU0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Gm11687-201ENSMUST00000118911 886 ntBASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Gm16437-201ENSMUST00000025669 507 ntBASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1b1Q99LU0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b1Q99LU0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Chmp1b1Q99LU0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp1b1Q99LU0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp1b1Q99LU0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp1b1Q99LU0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp1b1Q99LU0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Mir6538-201ENSMUST00000183713 110 ntBASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b1Q99LU0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b1Q99LU0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp1b1Q99LU0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Chmp1b1Q99LU0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp1b1Q99LU0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms