Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rfc4Q99J62 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.77■■□□□ 1.72
Rfc4Q99J62 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rfc4Q99J62 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Rfc4Q99J62 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rfc4Q99J62 Gm10232-201ENSMUST00000089221 720 ntBASIC25.76■■□□□ 1.71
Rfc4Q99J62 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.76■■□□□ 1.71
Rfc4Q99J62 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Rfc4Q99J62 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.75■■□□□ 1.71
Rfc4Q99J62 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rfc4Q99J62 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Rfc4Q99J62 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rfc4Q99J62 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.74■■□□□ 1.71
Rfc4Q99J62 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rfc4Q99J62 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Rfc4Q99J62 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Rfc4Q99J62 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rfc4Q99J62 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rfc4Q99J62 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rfc4Q99J62 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.73■■□□□ 1.71
Rfc4Q99J62 Etf1-202ENSMUST00000180351 108 ntBASIC25.72■■□□□ 1.71
Rfc4Q99J62 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
Rfc4Q99J62 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.72■■□□□ 1.71
Rfc4Q99J62 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rfc4Q99J62 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.71■■□□□ 1.71
Rfc4Q99J62 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rfc4Q99J62 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.71■■□□□ 1.71
Rfc4Q99J62 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Rfc4Q99J62 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rfc4Q99J62 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rfc4Q99J62 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rfc4Q99J62 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Rfc4Q99J62 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rfc4Q99J62 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
Rfc4Q99J62 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rfc4Q99J62 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rfc4Q99J62 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rfc4Q99J62 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Rfc4Q99J62 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Rfc4Q99J62 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.68■■□□□ 1.7
Rfc4Q99J62 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.68■■□□□ 1.7
Rfc4Q99J62 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Rfc4Q99J62 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rfc4Q99J62 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Rfc4Q99J62 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.66■■□□□ 1.7
Rfc4Q99J62 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rfc4Q99J62 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Rfc4Q99J62 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rfc4Q99J62 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
Rfc4Q99J62 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rfc4Q99J62 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rfc4Q99J62 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rfc4Q99J62 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Rfc4Q99J62 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rfc4Q99J62 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rfc4Q99J62 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rfc4Q99J62 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rfc4Q99J62 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rfc4Q99J62 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.62■■□□□ 1.69
Rfc4Q99J62 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.62■■□□□ 1.69
Rfc4Q99J62 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Rfc4Q99J62 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.61■■□□□ 1.69
Rfc4Q99J62 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rfc4Q99J62 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
Rfc4Q99J62 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rfc4Q99J62 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rfc4Q99J62 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
Rfc4Q99J62 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rfc4Q99J62 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rfc4Q99J62 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rfc4Q99J62 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rfc4Q99J62 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.58■■□□□ 1.69
Rfc4Q99J62 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rfc4Q99J62 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rfc4Q99J62 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rfc4Q99J62 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rfc4Q99J62 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.56■■□□□ 1.68
Rfc4Q99J62 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rfc4Q99J62 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Rfc4Q99J62 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rfc4Q99J62 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rfc4Q99J62 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rfc4Q99J62 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.54■■□□□ 1.68
Rfc4Q99J62 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms